CDS

Accession Number TCMCG051C02411
gbkey CDS
Protein Id XP_024462965.1
Location complement(join(15351807..15352148,15352819..15352905,15353160..15353270,15353445..15353530,15353898..15354009,15354149..15354337,15354441..15354587))
Gene LOC7490987
GeneID 7490987
Organism Populus trichocarpa

Protein

Length 357aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024607197.1
Definition DNA-repair protein XRCC1 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA repair protein
KEGG_TC -
KEGG_Module M00296        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10803        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03410        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
GOs GO:0000726        [VIEW IN EMBL-EBI]
GO:0001666        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006266        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010385        [VIEW IN EMBL-EBI]
GO:0010562        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010921        [VIEW IN EMBL-EBI]
GO:0010922        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035303        [VIEW IN EMBL-EBI]
GO:0035306        [VIEW IN EMBL-EBI]
GO:0035510        [VIEW IN EMBL-EBI]
GO:0036293        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045937        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070482        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080111        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901968        [VIEW IN EMBL-EBI]
GO:1901969        [VIEW IN EMBL-EBI]
GO:1901971        [VIEW IN EMBL-EBI]
GO:1901972        [VIEW IN EMBL-EBI]
GO:1902544        [VIEW IN EMBL-EBI]
GO:1902546        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGATTCAAAGAGAAGTGGTGGAGGGGGTAGTAGTAAAAAGCGAAATCTTCCTTCATGGATGAGTTCCAAAGACAATGAGAATAAATCTCATGGGAAGAAGGCAGCAGCAACTTCTGCCGAAGACGAACAATCTAAACTTCTGGACGGTGTGGTGTTTGTATTGTCCGGCTTTGTTAATCCTGAGCGTGCTACATTGCGGTCCCAGGCTTTAGAAATGGGAGCGGAGTATCGACCAGACTGGACCTCAGATTGCACTCTCTTGGTTTGTGCTTATTCAAATACTCCAAAGTTTCGACAAGTTGAGGCGGATTGTGGAACCATTGTTAAGAAGGAATGGATACTAGAGTGTTACAGCCAAAAGAAGCTAGTTGAAATTGATAGTTATCTTATGCATGCTGGGAAACCTTGGCGGAAATCCAATATTTCTCACGAAAGAGGCAGTGATCAAAAGGCATCCCCACCTAGAAAATCTGACAAACAGGTCAAAAGCGGGTTGCATTCGAAGCCAACTGCCTCTACATCCTACAAGGTTAGAGCATCTAATCCCTCTAAAGAGTGCTTCTCTCCTTCTAAAGTGAAGGAGTGGGTTATTGACGATTTGAATAGAACCATCTCATGGCTGGAGAGTCAAGAGGAAAAGCCAGAGCCAAGCGAGATTAAACAAATAGCTGCAGAAGGCATCTTAATTTGCTTACAAGATGCCATAGATTTCCTTGAACAAAATCAGGATGTCCGGAAAATAACAGATCAGTGGAATGTTGTCCCTCACGCAGTTGAGGAGATGGTAAAGCTTGTAGATGGTGGAAATGCTTCATCTTCTCTTTCAAAGGAAGATCTTTGCAGGAAGGCGAAGGCATGTAAAGAAATCTATGAAGCAGAACTGAGCAGTTTAGATGGTTCAAAGAGTAAGAAACAAAGGTTGAAAAGTGATGAAAGTGGGAGTAGTAAAAGGACAAACACCGTCACTGGTGATGCAGCAGAGTATGACAGCGATGAAACAATTGAAATGACAAAGGAGGAAGTTGACATGGCGTACAATACTGTTGCTTCTAAATTTTTAAATGATTAG
Protein:  
MSDSKRSGGGGSSKKRNLPSWMSSKDNENKSHGKKAAATSAEDEQSKLLDGVVFVLSGFVNPERATLRSQALEMGAEYRPDWTSDCTLLVCAYSNTPKFRQVEADCGTIVKKEWILECYSQKKLVEIDSYLMHAGKPWRKSNISHERGSDQKASPPRKSDKQVKSGLHSKPTASTSYKVRASNPSKECFSPSKVKEWVIDDLNRTISWLESQEEKPEPSEIKQIAAEGILICLQDAIDFLEQNQDVRKITDQWNVVPHAVEEMVKLVDGGNASSSLSKEDLCRKAKACKEIYEAELSSLDGSKSKKQRLKSDESGSSKRTNTVTGDAAEYDSDETIEMTKEEVDMAYNTVASKFLND